Analysis

filter



3D | bioinformatics | DNA | genomics | Miscellaneous | motifs | pathway | protein | RNA | search | server | software |

analysis > 3Dtop
linkdescription
PDB

3-D biological macromolecular structure data
MMDB

macromolecular 3D structures and analysis
CATH

Protein Structure Classification
VAST

structure-structure similarity search


analysis > bioinformaticstop
linkdescription
TIGR CMR

Comprehensive Microbial Resource
Microarray

Microarray informatics
GeConT

Visualizing the genome context of a gene or group of genes


analysis > DNAtop
linkdescription
ClustalW

Alignments
CINEMA

Colour INteractive Editor for Multiple Alignments
WEBLOGOS

DNA motif logos
SilicoPCR

In silico experiments with complete genomes
MSA

Multiple Sequence Alignment
NEBcutter2

Restriction enzymes, cloning
EasyGene

Translate DNA to protein
EMBL

Translation Machine


analysis > genomicstop
linkdescription
OPTIMIZER

Codon usage optimizer
TIGR CMR

Comprehensive Microbial Resource
PipMaker

computes alignments of similar regions in two DNA
DOOR

Database of prOkaryotic OpeRons
GENE ONTOLOGY

Gene onthology COG
SilicoPCR

In silico experiments with complete genomes
Staden

Sequencing assembling
SubtiList

SubtiList World-Wide Web Server
EnteriX

Visualization Tools for Bacterial Genome Alignments


analysis > Miscellaneoustop
linkdescription
STRING

Search Tool for the Retrieval of Interacting Genes/Proteins
ENA

Submission/Update of sequences


analysis > motifstop
linkdescription
WEBLOGOS

DNA motif logos
MEME

Motif finding
MDscan

Motif Finding Algorithm
TMHMM

Prediction of transmembrane helixes in proteins
PRODOM

Protein domain database
PRINTS

protein fingerprints database
CATH

Protein Structure Classification
PPSEARCH

Sequence motifs
SignalP

Signal peptidase prediction
PFAM

The Pfam database of protein domains and HMMs


analysis > pathwaytop
linkdescription
KEGG

Kyoto Encyclopedia of Genes and Genomes
Metabolic Pathway

Metabolic Pathway


analysis > proteintop
linkdescription
ClustalW

Alignments
OPTIMIZER

Codon usage optimizer
CINEMA

Colour INteractive Editor for Multiple Alignments
MSA

Multiple Sequence Alignment
NPS Lyon

Network Protein Sequence Analysis
pI/Mw

pI/Mw tool
Lipoprotein

prediction server
SCOP

Structural Classification of Proteins
VAST

structure-structure similarity search
EasyGene

Translate DNA to protein
UniProt

UniProt


analysis > RNAtop
linkdescription
ClustalW

Alignments


analysis > searchtop
linkdescription
BLAST

@ japan
BLAST

@ NCBI
BGSC

Bacillus Genetic Stock Center
DBTBS

DBTBS B. subtilis promoters and transcription factors
CGSG

E.coli Genetic Stock Center
IL1403

IL 1403 genome
FASTA3

scan a protein or DNA sequence library for similar
SGC

Table of Standard Genetic Code
TubercuList

TubercuList: Mycobacterium tuberculosis


analysis > servertop
linkdescription
PDB

3-D biological macromolecular structure data
BiBiServ

BiBiServ Sequence Analysis Department
CBS

Center for Biological Sequence Analysis
CMBI

Centre for Molecular and Biomolecular Informatics
SANGER

Complete Sanger software collection
TIGR CMR

Comprehensive Microbial Resource
TBI

Computational Services and Software
EMBL

Computational Services at EMBL
GENECARDS

database of human genes
LIPPER

Harvard-Lipper Center for Computational Genetics
ExPASy

Molecular Biology Server
Genbank ftp

NCBI ftp server genomes
NPS Lyon

Network Protein Sequence Analysis
TIGR

The Institute for Genomic institute
UniProt

UniProt
CMR MBR

Very large resource link page
GeConT

Visualizing the genome context of a gene or group of genes
VOIGT

VOIGT lab Web Tools


analysis > softwaretop
linkdescription
SANGER

Complete Sanger software collection
Staden

Sequencing assembling
GeConT

Visualizing the genome context of a gene or group of genes



MolGen | RuG | GBB

Copyright © 2020 MolGen. All Rights Reserved.